Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs2096188 chr9:115566594 A/G 4.42E-9 298 8 19.43 23.12 KM Plot
CESC rs2100238 chr3:161058055 T/A 2.55E-5 299 25.82 20.63 19.05 KM Plot
CESC rs2114833 chr10:88225388 G/C 1.6E-14 297 3.33 24.6 21.17 KM Plot
CESC rs2153839 chr9:115559659 A/G 3.03E-5 288 8.43 24.63 23.12 KM Plot
CESC rs2236403 chr14:90736325 C/T 2.26E-5 299 20.63 21.4 24.33 KM Plot
CESC rs2237905 chr11:2976584 T/C 4.96E-5 297 21.27 21.15 23.32 KM Plot
CESC rs2242626 chr14:77324937 A/G 8.37E-5 299 21.33 21.97 7.67 KM Plot
CESC rs2271293 chr16:67902070 A/G 5.25E-5 299 18.17 25.13 21.2 KM Plot
CESC rs2272634 chr8:144400089 C/T 2.43E-5 293 27.2 21.1 17.32 KM Plot
CESC rs2273549 chr11:33079580 A/G 5.0E-6 299 21.4 26.77 1.73 KM Plot
CESC rs2273551 chr11:33097691 C/T 0 297 21.97 20.13 0.5 KM Plot
CESC rs2273553 chr11:33097877 A/G 4.33E-5 299 1.73 21.08 21.85 KM Plot
CESC rs2275722 chr10:135077020 C/T 1.92E-10 295 11.6 21.85 21.23 KM Plot
CESC rs2275725 chr10:135089035 A/G 4.59E-10 296 7.47 21.73 21.4 KM Plot
CESC rs2292316 chr16:67861134 C/G 3.67E-5 299 16.92 25.82 21.07 KM Plot